Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 TSSK5P-201ENST00000423978 907 ntBASIC14.78□□□□□ -0.04
HMGCS1Q01581 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 ZNF890P-202ENST00000530367 1156 ntBASIC14.78□□□□□ -0.04
HMGCS1Q01581 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 AC000095.1-201ENST00000603208 874 ntBASIC14.78□□□□□ -0.04
HMGCS1Q01581 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.78□□□□□ -0.04
HMGCS1Q01581 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HMGCS1Q01581 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCS1Q01581 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 OR2I1P-209ENST00000641730 5365 ntBASIC14.77□□□□□ -0.04
HMGCS1Q01581 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.77□□□□□ -0.04
HMGCS1Q01581 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCS1Q01581 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 AC241585.1-201ENST00000433527 519 ntBASIC14.77□□□□□ -0.05
HMGCS1Q01581 AC114501.2-201ENST00000439631 535 ntBASIC14.77□□□□□ -0.05
HMGCS1Q01581 CYMP-203ENST00000474680 1263 ntBASIC14.77□□□□□ -0.05
HMGCS1Q01581 SPDYE18-201ENST00000510091 1050 ntBASIC14.77□□□□□ -0.05
HMGCS1Q01581 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 AC009407.1-201ENST00000568958 598 ntBASIC14.77□□□□□ -0.05
HMGCS1Q01581 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 AC093512.1-201ENST00000617969 520 ntBASIC14.77□□□□□ -0.05
HMGCS1Q01581 AL158212.4-201ENST00000624062 1286 ntBASIC14.77□□□□□ -0.05
HMGCS1Q01581 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HMGCS1Q01581 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCS1Q01581 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCS1Q01581 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms