Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.58□□□□□ -0.24
NKX6-1P78426 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
NKX6-1P78426 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
NKX6-1P78426 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX6-1P78426 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.58□□□□□ -0.24
NKX6-1P78426 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 KRT18P64-201ENST00000434946 1219 ntBASIC13.58□□□□□ -0.24
NKX6-1P78426 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NKX6-1P78426 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 AL355994.2-201ENST00000447882 704 ntBASIC13.58□□□□□ -0.24
NKX6-1P78426 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX6-1P78426 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX6-1P78426 USP32P1-208ENST00000506594 1164 ntBASIC13.58□□□□□ -0.24
NKX6-1P78426 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX6-1P78426 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX6-1P78426 AC103810.3-201ENST00000583567 96 ntBASIC13.58□□□□□ -0.24
NKX6-1P78426 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 AC104581.4-201ENST00000623126 3052 ntBASIC13.58□□□□□ -0.24
NKX6-1P78426 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-1P78426 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-1P78426 AC020907.1-201ENST00000616460 1350 ntBASIC13.58□□□□□ -0.24
NKX6-1P78426 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-1P78426 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 KRT8P22-201ENST00000562317 1415 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX6-1P78426 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX6-1P78426 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
NKX6-1P78426 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX6-1P78426 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NKX6-1P78426 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.57□□□□□ -0.24
NKX6-1P78426 FAM21FP-201ENST00000426241 1131 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 AL162726.2-201ENST00000438986 1017 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-1P78426 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-1P78426 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-1P78426 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.57□□□□□ -0.24
NKX6-1P78426 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-1P78426 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.57□□□□□ -0.24
NKX6-1P78426 AL022328.1-201ENST00000610050 478 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 AL158212.4-201ENST00000624062 1286 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NKX6-1P78426 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NKX6-1P78426 TUBB1P2-201ENST00000422712 1306 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 TUBB1P1-201ENST00000503144 1300 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 AL365203.3-201ENST00000609742 2057 ntBASIC13.57□□□□□ -0.24
NKX6-1P78426 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NKX6-1P78426 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-1P78426 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.57□□□□□ -0.24
NKX6-1P78426 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX6-1P78426 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-1P78426 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms