Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBA52P62987 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UBA52P62987 AL122018.1-201ENST00000446607 2310 ntBASIC13.31□□□□□ -0.28
UBA52P62987 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.31□□□□□ -0.28
UBA52P62987 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
UBA52P62987 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 AC131009.4-201ENST00000624048 1740 ntBASIC13.31□□□□□ -0.28
UBA52P62987 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.31□□□□□ -0.28
UBA52P62987 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.31□□□□□ -0.28
UBA52P62987 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBA52P62987 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 AC105233.2-201ENST00000523697 349 ntBASIC13.31□□□□□ -0.28
UBA52P62987 AF228730.5-201ENST00000530288 346 ntBASIC13.31□□□□□ -0.28
UBA52P62987 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.31□□□□□ -0.28
UBA52P62987 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.31□□□□□ -0.28
UBA52P62987 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.31□□□□□ -0.28
UBA52P62987 AC021097.1-201ENST00000607902 574 ntBASIC13.31□□□□□ -0.28
UBA52P62987 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 AC105250.1-201ENST00000509378 2057 ntBASIC13.31□□□□□ -0.28
UBA52P62987 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 AC022144.1-201ENST00000602255 1580 ntBASIC13.31□□□□□ -0.28
UBA52P62987 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
UBA52P62987 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.31□□□□□ -0.28
UBA52P62987 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBA52P62987 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
UBA52P62987 AC140479.7-201ENST00000636301 2332 ntBASIC13.3□□□□□ -0.28
UBA52P62987 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.3□□□□□ -0.28
UBA52P62987 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.3□□□□□ -0.28
UBA52P62987 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.3□□□□□ -0.28
UBA52P62987 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.3□□□□□ -0.28
UBA52P62987 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.3□□□□□ -0.28
UBA52P62987 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
UBA52P62987 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 AC136759.1-202ENST00000530858 2194 ntBASIC13.3□□□□□ -0.28
UBA52P62987 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.3□□□□□ -0.28
UBA52P62987 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
UBA52P62987 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.3□□□□□ -0.28
UBA52P62987 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.3□□□□□ -0.28
UBA52P62987 AC142381.1-201ENST00000426099 345 ntBASIC13.3□□□□□ -0.28
UBA52P62987 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.3□□□□□ -0.28
UBA52P62987 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.3□□□□□ -0.28
UBA52P62987 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.3□□□□□ -0.28
UBA52P62987 RN7SL692P-201ENST00000464677 288 ntBASIC13.3□□□□□ -0.28
UBA52P62987 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.3□□□□□ -0.28
UBA52P62987 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.3□□□□□ -0.28
UBA52P62987 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 AL596325.1-201ENST00000563991 1082 ntBASIC13.3□□□□□ -0.28
UBA52P62987 MPDU1-223ENST00000582151 728 ntBASIC13.3□□□□□ -0.28
UBA52P62987 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.3□□□□□ -0.28
UBA52P62987 SPDYE12P-201ENST00000618416 771 ntBASIC13.3□□□□□ -0.28
UBA52P62987 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 MBLAC2-202ENST00000514906 1936 ntBASIC13.3□□□□□ -0.28
UBA52P62987 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.3□□□□□ -0.28
UBA52P62987 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.3□□□□□ -0.28
UBA52P62987 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBA52P62987 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms