Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO4P61968 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO4P61968 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO4P61968 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO4P61968 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LMO4P61968 AL138725.1-201ENST00000407347 1314 ntBASIC12.43□□□□□ -0.42
LMO4P61968 AC011840.2-201ENST00000563063 1520 ntBASIC12.43□□□□□ -0.42
LMO4P61968 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 TMBIM7P-203ENST00000641617 1718 ntBASIC12.43□□□□□ -0.42
LMO4P61968 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.43□□□□□ -0.42
LMO4P61968 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
LMO4P61968 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 AC009093.2-202ENST00000620513 2079 ntBASIC12.43□□□□□ -0.42
LMO4P61968 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
LMO4P61968 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.43□□□□□ -0.42
LMO4P61968 AC005077.2-201ENST00000449786 690 ntBASIC12.43□□□□□ -0.42
LMO4P61968 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO4P61968 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.43□□□□□ -0.42
LMO4P61968 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
LMO4P61968 AL136301.1-201ENST00000615830 422 ntBASIC12.43□□□□□ -0.42
LMO4P61968 AL023803.2-201ENST00000620080 638 ntBASIC12.43□□□□□ -0.42
LMO4P61968 AC022748.3-201ENST00000621828 275 ntBASIC12.43□□□□□ -0.42
LMO4P61968 AC068587.10-201ENST00000641210 219 ntBASIC12.43□□□□□ -0.42
LMO4P61968 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LMO4P61968 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LMO4P61968 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO4P61968 AC136621.1-201ENST00000624017 2304 ntBASIC12.43□□□□□ -0.42
LMO4P61968 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO4P61968 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 KRT8P29-201ENST00000420409 1371 ntBASIC12.43□□□□□ -0.42
LMO4P61968 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO4P61968 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO4P61968 AC126365.1-201ENST00000578585 1514 ntBASIC12.42□□□□□ -0.42
LMO4P61968 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 AC020910.5-201ENST00000623668 1865 ntBASIC12.42□□□□□ -0.42
LMO4P61968 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
LMO4P61968 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO4P61968 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 AC023024.2-201ENST00000623561 1993 ntBASIC12.42□□□□□ -0.42
LMO4P61968 RN7SKP230-201ENST00000365642 335 ntBASIC12.42□□□□□ -0.42
LMO4P61968 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO4P61968 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.42□□□□□ -0.42
LMO4P61968 SLC25A24P2-201ENST00000415059 510 ntBASIC12.42□□□□□ -0.42
LMO4P61968 AC016700.1-201ENST00000429424 312 ntBASIC12.42□□□□□ -0.42
LMO4P61968 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.42□□□□□ -0.42
LMO4P61968 AC021723.1-201ENST00000486306 515 ntBASIC12.42□□□□□ -0.42
LMO4P61968 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO4P61968 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO4P61968 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.42□□□□□ -0.42
LMO4P61968 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms