Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
GFRA1P56159 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 AC026434.2-201ENST00000506094 1078 ntBASIC13.65□□□□□ -0.22
GFRA1P56159 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.65□□□□□ -0.22
GFRA1P56159 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.65□□□□□ -0.22
GFRA1P56159 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.65□□□□□ -0.22
GFRA1P56159 DUX4L45-201ENST00000566406 1057 ntBASIC13.65□□□□□ -0.22
GFRA1P56159 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.65□□□□□ -0.22
GFRA1P56159 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.65□□□□□ -0.22
GFRA1P56159 AL033527.4-201ENST00000641026 673 ntBASIC13.65□□□□□ -0.22
GFRA1P56159 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.65□□□□□ -0.22
GFRA1P56159 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GFRA1P56159 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
GFRA1P56159 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.64□□□□□ -0.23
GFRA1P56159 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
GFRA1P56159 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GFRA1P56159 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.64□□□□□ -0.23
GFRA1P56159 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 LILRP1-201ENST00000444199 1370 ntBASIC13.64□□□□□ -0.23
GFRA1P56159 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.64□□□□□ -0.23
GFRA1P56159 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.64□□□□□ -0.23
GFRA1P56159 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
GFRA1P56159 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GFRA1P56159 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.64□□□□□ -0.23
GFRA1P56159 FAM21FP-201ENST00000426241 1131 ntBASIC13.64□□□□□ -0.23
GFRA1P56159 YBX1P6-201ENST00000442962 1002 ntBASIC13.64□□□□□ -0.23
GFRA1P56159 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.64□□□□□ -0.23
GFRA1P56159 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.64□□□□□ -0.23
GFRA1P56159 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.64□□□□□ -0.23
GFRA1P56159 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GFRA1P56159 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.64□□□□□ -0.23
GFRA1P56159 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
GFRA1P56159 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GFRA1P56159 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.64□□□□□ -0.23
GFRA1P56159 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GFRA1P56159 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GFRA1P56159 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 REXO1L2P-201ENST00000425429 2069 ntBASIC13.63□□□□□ -0.23
GFRA1P56159 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GFRA1P56159 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms