Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CDH12P55289 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CDH12P55289 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 CNN2P11-201ENST00000429351 262 ntBASIC14.32□□□□□ -0.12
CDH12P55289 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.32□□□□□ -0.12
CDH12P55289 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 AL589739.1-201ENST00000607720 493 ntBASIC14.32□□□□□ -0.12
CDH12P55289 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH12P55289 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH12P55289 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH12P55289 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH12P55289 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH12P55289 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CDH12P55289 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH12P55289 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH12P55289 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDH12P55289 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH12P55289 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.31□□□□□ -0.12
CDH12P55289 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH12P55289 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH12P55289 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CDH12P55289 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH12P55289 AL512356.2-201ENST00000546955 174 ntBASIC14.31□□□□□ -0.12
CDH12P55289 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH12P55289 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH12P55289 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 AC134684.3-201ENST00000641758 218 ntBASIC14.31□□□□□ -0.12
CDH12P55289 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDH12P55289 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH12P55289 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH12P55289 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDH12P55289 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH12P55289 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH12P55289 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH12P55289 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH12P55289 BX640514.1-201ENST00000583223 1918 ntBASIC14.31□□□□□ -0.12
CDH12P55289 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms