Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.98□□□□□ -0.17
CENPAP49450 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.98□□□□□ -0.17
CENPAP49450 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CENPAP49450 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.98□□□□□ -0.17
CENPAP49450 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CENPAP49450 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 WASH3P-207ENST00000560956 1394 ntBASIC13.97□□□□□ -0.17
CENPAP49450 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 FO538757.1-201ENST00000623083 1397 ntBASIC13.97□□□□□ -0.17
CENPAP49450 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CENPAP49450 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 SPDYE7P-202ENST00000420373 878 ntBASIC13.97□□□□□ -0.17
CENPAP49450 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 SPDYE14P-201ENST00000442619 822 ntBASIC13.97□□□□□ -0.17
CENPAP49450 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.97□□□□□ -0.17
CENPAP49450 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 AL589739.1-201ENST00000607720 493 ntBASIC13.97□□□□□ -0.17
CENPAP49450 AL596442.2-201ENST00000610240 980 ntBASIC13.97□□□□□ -0.17
CENPAP49450 AC007967.4-201ENST00000614700 386 ntBASIC13.97□□□□□ -0.17
CENPAP49450 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 AC015656.1-201ENST00000624209 3578 ntBASIC13.97□□□□□ -0.17
CENPAP49450 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.97□□□□□ -0.17
CENPAP49450 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.97□□□□□ -0.17
CENPAP49450 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CENPAP49450 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.96□□□□□ -0.17
CENPAP49450 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CENPAP49450 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CENPAP49450 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms