Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.16□□□□□ -0.46
CDC34P49427 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.16□□□□□ -0.46
CDC34P49427 AC091304.2-201ENST00000564639 760 ntBASIC12.16□□□□□ -0.46
CDC34P49427 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.16□□□□□ -0.46
CDC34P49427 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 LINC01711-201ENST00000598340 967 ntBASIC12.16□□□□□ -0.46
CDC34P49427 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.16□□□□□ -0.46
CDC34P49427 AC097359.3-201ENST00000603982 1210 ntBASIC12.16□□□□□ -0.46
CDC34P49427 SPTSSB-204ENST00000617024 1292 ntBASIC12.16□□□□□ -0.46
CDC34P49427 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CDC34P49427 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 AC015802.1-201ENST00000588104 1449 ntBASIC12.16□□□□□ -0.46
CDC34P49427 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CDC34P49427 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 AC018442.1-201ENST00000421439 2061 ntBASIC12.15□□□□□ -0.46
CDC34P49427 AC011474.4-201ENST00000623523 2076 ntBASIC12.15□□□□□ -0.46
CDC34P49427 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 AKR1C7P-201ENST00000305623 895 ntBASIC12.15□□□□□ -0.46
CDC34P49427 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.15□□□□□ -0.46
CDC34P49427 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.15□□□□□ -0.46
CDC34P49427 AC140658.5-201ENST00000438532 169 ntBASIC12.15□□□□□ -0.46
CDC34P49427 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.15□□□□□ -0.46
CDC34P49427 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 AL161645.1-201ENST00000622716 1255 ntBASIC12.15□□□□□ -0.46
CDC34P49427 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.15□□□□□ -0.46
CDC34P49427 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CDC34P49427 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CDC34P49427 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CDC34P49427 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms