Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPRAP18433 MIR7845-201ENST00000618396 99 ntBASIC17.46■□□□□ 0.39
PTPRAP18433 AC006453.1-201ENST00000636037 1257 ntBASIC17.46■□□□□ 0.39
PTPRAP18433 Z98259.2-201ENST00000641583 609 ntBASIC17.46■□□□□ 0.39
PTPRAP18433 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPRAP18433 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PTPRAP18433 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPRAP18433 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPRAP18433 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTPRAP18433 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPRAP18433 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPRAP18433 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPRAP18433 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPRAP18433 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PTPRAP18433 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
PTPRAP18433 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPRAP18433 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PTPRAP18433 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPRAP18433 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPRAP18433 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
PTPRAP18433 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTPRAP18433 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPRAP18433 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPRAP18433 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPRAP18433 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPRAP18433 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPRAP18433 MIR3147-201ENST00000577811 66 ntBASIC17.45■□□□□ 0.38
PTPRAP18433 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.45■□□□□ 0.38
PTPRAP18433 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.45■□□□□ 0.38
PTPRAP18433 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PTPRAP18433 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPRAP18433 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPRAP18433 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPRAP18433 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPRAP18433 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPRAP18433 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPRAP18433 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
PTPRAP18433 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPRAP18433 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPRAP18433 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPRAP18433 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 AL513523.2-202ENST00000427283 2040 ntBASIC17.44■□□□□ 0.38
PTPRAP18433 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 AC073150.1-201ENST00000450406 1084 ntBASIC17.44■□□□□ 0.38
PTPRAP18433 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 MIR4754-201ENST00000582477 89 ntBASIC17.44■□□□□ 0.38
PTPRAP18433 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTPRAP18433 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTPRAP18433 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPRAP18433 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPRAP18433 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTPRAP18433 AC003102.2-201ENST00000589195 1469 ntBASIC17.44■□□□□ 0.38
PTPRAP18433 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTPRAP18433 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPRAP18433 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPRAP18433 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPRAP18433 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPRAP18433 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPRAP18433 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPRAP18433 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPRAP18433 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPRAP18433 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPRAP18433 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPRAP18433 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPRAP18433 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPRAP18433 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms