Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.08■□□□□ 0.8
CSB-PGBD3P0DP91 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.08■□□□□ 0.8
CSB-PGBD3P0DP91 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSB-PGBD3P0DP91 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.08■□□□□ 0.8
CSB-PGBD3P0DP91 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSB-PGBD3P0DP91 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 AC009093.2-202ENST00000620513 2079 ntBASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 MST1L-201ENST00000442552 2185 ntBASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 RN7SKP214-201ENST00000364208 315 ntBASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 FGFR3P1-201ENST00000449999 601 ntBASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 RN7SL555P-201ENST00000584742 339 ntBASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 NAP1L6-202ENST00000641404 1222 ntBASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CSB-PGBD3P0DP91 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 PDIA3P2-201ENST00000428073 158 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 CEP164P1-201ENST00000455142 418 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 RCC2P8-201ENST00000502779 1035 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 DUX4L46-201ENST00000566845 751 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 SNORD3B-2-202ENST00000571722 791 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 MIR4750-201ENST00000584564 56 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CSB-PGBD3P0DP91 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 AL360270.3-201ENST00000609118 1348 ntBASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.05■□□□□ 0.8
CSB-PGBD3P0DP91 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms