Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.66■□□□□ 0.26
VTNP04004 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.66■□□□□ 0.26
VTNP04004 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VTNP04004 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VTNP04004 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VTNP04004 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.66■□□□□ 0.26
VTNP04004 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VTNP04004 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.66■□□□□ 0.26
VTNP04004 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VTNP04004 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.66■□□□□ 0.26
VTNP04004 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VTNP04004 AC012508.2-201ENST00000567613 1472 ntBASIC16.66■□□□□ 0.26
VTNP04004 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VTNP04004 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VTNP04004 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
VTNP04004 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VTNP04004 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.66■□□□□ 0.26
VTNP04004 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VTNP04004 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VTNP04004 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 AC018735.1-201ENST00000437208 1502 ntBASIC16.65■□□□□ 0.26
VTNP04004 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.65■□□□□ 0.26
VTNP04004 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.65■□□□□ 0.26
VTNP04004 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.65■□□□□ 0.26
VTNP04004 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 HSPB1P2-201ENST00000448722 546 ntBASIC16.65■□□□□ 0.26
VTNP04004 FTLP10-202ENST00000505798 471 ntBASIC16.65■□□□□ 0.26
VTNP04004 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.65■□□□□ 0.26
VTNP04004 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.65■□□□□ 0.26
VTNP04004 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
VTNP04004 AC103810.3-201ENST00000583567 96 ntBASIC16.65■□□□□ 0.26
VTNP04004 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.65■□□□□ 0.26
VTNP04004 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.65■□□□□ 0.26
VTNP04004 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VTNP04004 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 AC023024.2-201ENST00000623561 1993 ntBASIC16.65■□□□□ 0.26
VTNP04004 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VTNP04004 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
VTNP04004 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VTNP04004 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.65■□□□□ 0.26
VTNP04004 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
VTNP04004 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
VTNP04004 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.64■□□□□ 0.25
VTNP04004 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VTNP04004 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VTNP04004 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
VTNP04004 HIST2H2BB-201ENST00000449108 381 ntBASIC16.64■□□□□ 0.25
VTNP04004 KRT8P13-201ENST00000463294 1010 ntBASIC16.64■□□□□ 0.25
VTNP04004 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.64■□□□□ 0.25
VTNP04004 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.64■□□□□ 0.25
VTNP04004 MESTP3-201ENST00000503460 968 ntBASIC16.64■□□□□ 0.25
VTNP04004 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.64■□□□□ 0.25
VTNP04004 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.64■□□□□ 0.25
VTNP04004 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.64■□□□□ 0.25
VTNP04004 AP001258.2-201ENST00000529891 490 ntBASIC16.64■□□□□ 0.25
VTNP04004 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.64■□□□□ 0.25
VTNP04004 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VTNP04004 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
VTNP04004 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.64■□□□□ 0.25
VTNP04004 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms