Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ENPP7P14-201ENST00000621765 1040 ntBASIC15.99■□□□□ 0.15
BEST1O76090 AC138951.2-201ENST00000623455 1161 ntBASIC15.99■□□□□ 0.15
BEST1O76090 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
BEST1O76090 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
BEST1O76090 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BEST1O76090 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST1O76090 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
BEST1O76090 ACE3P-201ENST00000423435 1973 ntBASIC15.98■□□□□ 0.15
BEST1O76090 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 AP002414.2-201ENST00000591780 3365 ntBASIC15.98■□□□□ 0.15
BEST1O76090 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST1O76090 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST1O76090 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST1O76090 AC244107.1-201ENST00000442033 332 ntBASIC15.98■□□□□ 0.15
BEST1O76090 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.98■□□□□ 0.15
BEST1O76090 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.98■□□□□ 0.15
BEST1O76090 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
BEST1O76090 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.98■□□□□ 0.15
BEST1O76090 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
BEST1O76090 RHOXF1P1-202ENST00000635473 501 ntBASIC15.98■□□□□ 0.15
BEST1O76090 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
BEST1O76090 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
BEST1O76090 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
BEST1O76090 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.98■□□□□ 0.15
BEST1O76090 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST1O76090 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.97■□□□□ 0.15
BEST1O76090 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST1O76090 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST1O76090 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.97■□□□□ 0.15
BEST1O76090 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
BEST1O76090 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.97■□□□□ 0.15
BEST1O76090 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.97■□□□□ 0.15
BEST1O76090 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.97■□□□□ 0.15
BEST1O76090 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.97■□□□□ 0.15
BEST1O76090 FO681548.1-201ENST00000455617 1132 ntBASIC15.97■□□□□ 0.15
BEST1O76090 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST1O76090 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
BEST1O76090 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.97■□□□□ 0.15
BEST1O76090 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 TCAF2P1-201ENST00000291129 2421 ntBASIC15.97■□□□□ 0.15
BEST1O76090 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.97■□□□□ 0.15
BEST1O76090 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BEST1O76090 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
BEST1O76090 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 ZBED1P1-201ENST00000502364 1930 ntBASIC15.96■□□□□ 0.15
BEST1O76090 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
BEST1O76090 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.96■□□□□ 0.15
BEST1O76090 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
BEST1O76090 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
BEST1O76090 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms