Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 AC073347.1-201ENST00000421633 2643 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CPNE3O75131 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE3O75131 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 BCRP2-202ENST00000447763 634 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 KLF2P4-201ENST00000451959 1225 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 AC119751.2-201ENST00000504529 210 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 BCRP6-201ENST00000510112 632 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 BCRP7-201ENST00000511549 544 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 AC026410.3-201ENST00000514280 936 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.78□□□□□ -0.04
CPNE3O75131 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE3O75131 CLUHP6-201ENST00000580789 941 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.78□□□□□ -0.04
CPNE3O75131 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE3O75131 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.78□□□□□ -0.04
CPNE3O75131 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.78□□□□□ -0.04
CPNE3O75131 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 AL603832.2-201ENST00000566195 2125 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CPNE3O75131 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CPNE3O75131 AC069224.1-201ENST00000566372 1715 ntBASIC14.78□□□□□ -0.04
CPNE3O75131 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CPNE3O75131 PDIA3P1-201ENST00000471856 1510 ntBASIC14.77□□□□□ -0.04
CPNE3O75131 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CPNE3O75131 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
CPNE3O75131 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
CPNE3O75131 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.77□□□□□ -0.04
CPNE3O75131 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
CPNE3O75131 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE3O75131 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE3O75131 AC010491.1-201ENST00000563101 2797 ntBASIC14.77□□□□□ -0.04
CPNE3O75131 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE3O75131 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CPNE3O75131 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CPNE3O75131 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CPNE3O75131 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE3O75131 BAATP1-201ENST00000412284 1225 ntBASIC14.77□□□□□ -0.05
CPNE3O75131 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.77□□□□□ -0.05
CPNE3O75131 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE3O75131 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 CTBP2P5-201ENST00000454986 1264 ntBASIC14.77□□□□□ -0.05
CPNE3O75131 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE3O75131 AP001889.1-201ENST00000525414 633 ntBASIC14.77□□□□□ -0.05
CPNE3O75131 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE3O75131 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.77□□□□□ -0.05
CPNE3O75131 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
CPNE3O75131 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CPNE3O75131 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 AC005252.2-201ENST00000624630 1141 ntBASIC14.77□□□□□ -0.05
CPNE3O75131 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CPNE3O75131 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.77□□□□□ -0.05
CPNE3O75131 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CPNE3O75131 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CPNE3O75131 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms