Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.64□□□□□ -0.23
SGCEO43556 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SGCEO43556 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.64□□□□□ -0.23
SGCEO43556 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.64□□□□□ -0.23
SGCEO43556 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.64□□□□□ -0.23
SGCEO43556 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 CR383656.2-201ENST00000548656 2254 ntBASIC13.64□□□□□ -0.23
SGCEO43556 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SGCEO43556 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.63□□□□□ -0.23
SGCEO43556 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SGCEO43556 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.63□□□□□ -0.23
SGCEO43556 AC138969.3-201ENST00000546612 1459 ntBASIC13.63□□□□□ -0.23
SGCEO43556 AC138932.2-201ENST00000548268 1459 ntBASIC13.63□□□□□ -0.23
SGCEO43556 AC126755.4-201ENST00000549796 1459 ntBASIC13.63□□□□□ -0.23
SGCEO43556 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SGCEO43556 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.63□□□□□ -0.23
SGCEO43556 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SGCEO43556 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.63□□□□□ -0.23
SGCEO43556 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.63□□□□□ -0.23
SGCEO43556 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SGCEO43556 BASP1P1-201ENST00000430708 665 ntBASIC13.63□□□□□ -0.23
SGCEO43556 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.63□□□□□ -0.23
SGCEO43556 AC114501.2-201ENST00000439631 535 ntBASIC13.63□□□□□ -0.23
SGCEO43556 AC009477.1-201ENST00000452936 217 ntBASIC13.63□□□□□ -0.23
SGCEO43556 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SGCEO43556 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 AC004461.2-201ENST00000629517 803 ntBASIC13.63□□□□□ -0.23
SGCEO43556 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SGCEO43556 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
SGCEO43556 AL121723.1-201ENST00000445194 1519 ntBASIC13.63□□□□□ -0.23
SGCEO43556 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.63□□□□□ -0.23
SGCEO43556 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.63□□□□□ -0.23
SGCEO43556 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SGCEO43556 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SGCEO43556 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 AC022144.1-201ENST00000602255 1580 ntBASIC13.62□□□□□ -0.23
SGCEO43556 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SGCEO43556 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 AC023024.2-201ENST00000623561 1993 ntBASIC13.62□□□□□ -0.23
SGCEO43556 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.62□□□□□ -0.23
SGCEO43556 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.62□□□□□ -0.23
SGCEO43556 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SGCEO43556 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.62□□□□□ -0.23
SGCEO43556 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.62□□□□□ -0.23
SGCEO43556 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.62□□□□□ -0.23
SGCEO43556 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SGCEO43556 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms