Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF113AO15541 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF113AO15541 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF113AO15541 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF113AO15541 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF113AO15541 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RNF113AO15541 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF113AO15541 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RNF113AO15541 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF113AO15541 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF113AO15541 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF113AO15541 ACA64.2-201ENST00000459014 129 ntBASIC18.27■□□□□ 0.52
RNF113AO15541 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RNF113AO15541 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF113AO15541 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF113AO15541 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 HILS1-202ENST00000545329 423 ntBASIC18.27■□□□□ 0.52
RNF113AO15541 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF113AO15541 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF113AO15541 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF113AO15541 AC004466.1-201ENST00000599515 1080 ntBASIC18.27■□□□□ 0.52
RNF113AO15541 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF113AO15541 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF113AO15541 AC006058.4-201ENST00000624016 1670 ntBASIC18.27■□□□□ 0.52
RNF113AO15541 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF113AO15541 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF113AO15541 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF113AO15541 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF113AO15541 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.27■□□□□ 0.51
RNF113AO15541 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RNF113AO15541 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF113AO15541 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RNF113AO15541 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF113AO15541 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF113AO15541 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF113AO15541 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF113AO15541 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF113AO15541 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF113AO15541 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF113AO15541 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 C2orf27AP3-201ENST00000434123 579 ntBASIC18.26■□□□□ 0.51
RNF113AO15541 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.26■□□□□ 0.51
RNF113AO15541 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF113AO15541 RN7SL48P-201ENST00000579283 293 ntBASIC18.26■□□□□ 0.51
RNF113AO15541 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF113AO15541 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF113AO15541 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RNF113AO15541 AL354718.3-201ENST00000616414 581 ntBASIC18.26■□□□□ 0.51
RNF113AO15541 CR382287.1-201ENST00000623954 586 ntBASIC18.26■□□□□ 0.51
RNF113AO15541 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 PDIA3P1-201ENST00000471856 1510 ntBASIC18.26■□□□□ 0.51
RNF113AO15541 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF113AO15541 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF113AO15541 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF113AO15541 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF113AO15541 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF113AO15541 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 DBET-201ENST00000630918 3363 ntBASIC18.26■□□□□ 0.51
RNF113AO15541 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF113AO15541 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF113AO15541 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF113AO15541 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF113AO15541 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF113AO15541 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF113AO15541 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF113AO15541 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF113AO15541 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF113AO15541 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF113AO15541 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms