Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AP3B1O00203 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3B1O00203 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3B1O00203 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3B1O00203 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.5■□□□□ 0.07
AP3B1O00203 AC135586.1-201ENST00000539323 574 ntBASIC15.5■□□□□ 0.07
AP3B1O00203 RRP7BP-205ENST00000566851 833 ntBASIC15.5■□□□□ 0.07
AP3B1O00203 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3B1O00203 AC009407.1-201ENST00000568958 598 ntBASIC15.5■□□□□ 0.07
AP3B1O00203 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.5■□□□□ 0.07
AP3B1O00203 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3B1O00203 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.5■□□□□ 0.07
AP3B1O00203 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
AP3B1O00203 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3B1O00203 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3B1O00203 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.5■□□□□ 0.07
AP3B1O00203 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3B1O00203 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3B1O00203 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3B1O00203 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3B1O00203 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP3B1O00203 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AP3B1O00203 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3B1O00203 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
AP3B1O00203 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP3B1O00203 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.5■□□□□ 0.07
AP3B1O00203 LILRP1-201ENST00000444199 1370 ntBASIC15.49■□□□□ 0.07
AP3B1O00203 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
AP3B1O00203 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3B1O00203 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3B1O00203 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3B1O00203 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3B1O00203 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
AP3B1O00203 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3B1O00203 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.49■□□□□ 0.07
AP3B1O00203 DUX4L27-201ENST00000554796 1261 ntBASIC15.49■□□□□ 0.07
AP3B1O00203 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.49■□□□□ 0.07
AP3B1O00203 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.49■□□□□ 0.07
AP3B1O00203 AL390754.1-201ENST00000619088 582 ntBASIC15.49■□□□□ 0.07
AP3B1O00203 AC139530.3-201ENST00000620344 690 ntBASIC15.49■□□□□ 0.07
AP3B1O00203 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
AP3B1O00203 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP3B1O00203 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3B1O00203 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.49■□□□□ 0.07
AP3B1O00203 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.49■□□□□ 0.07
AP3B1O00203 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP3B1O00203 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP3B1O00203 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
AP3B1O00203 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
AP3B1O00203 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
AP3B1O00203 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.48■□□□□ 0.07
AP3B1O00203 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
AP3B1O00203 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.48■□□□□ 0.07
AP3B1O00203 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.48■□□□□ 0.07
AP3B1O00203 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
AP3B1O00203 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
AP3B1O00203 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.48■□□□□ 0.07
AP3B1O00203 BASP1P1-201ENST00000430708 665 ntBASIC15.48■□□□□ 0.07
AP3B1O00203 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.48■□□□□ 0.07
AP3B1O00203 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.48■□□□□ 0.07
AP3B1O00203 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.48■□□□□ 0.07
AP3B1O00203 AC004890.2-204ENST00000481968 304 ntBASIC15.48■□□□□ 0.07
AP3B1O00203 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.48■□□□□ 0.07
AP3B1O00203 AC093813.1-201ENST00000605066 256 ntBASIC15.48■□□□□ 0.07
AP3B1O00203 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
AP3B1O00203 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
AP3B1O00203 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms