Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 BTBD6P1-201ENST00000412176 1267 ntBASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 COX5BP1-201ENST00000507622 393 ntBASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MIR6869-201ENST00000619434 62 ntBASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TMBIM7P-203ENST00000641617 1718 ntBASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MIR326-201ENST00000362220 95 ntBASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MTX1P1-201ENST00000440904 838 ntBASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FTLP10-202ENST00000505798 471 ntBASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AP006547.1-201ENST00000563435 692 ntBASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 OR10B1P-201ENST00000601666 907 ntBASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms