Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 TFAMP1-201ENST00000412727 736 ntBASIC16.71■□□□□ 0.27
CCDC66A2RUB6 AL671277.1-201ENST00000429656 993 ntBASIC16.71■□□□□ 0.27
CCDC66A2RUB6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 RNA5SP410-201ENST00000516285 106 ntBASIC16.71■□□□□ 0.27
CCDC66A2RUB6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 AC106730.1-201ENST00000566722 1090 ntBASIC16.71■□□□□ 0.27
CCDC66A2RUB6 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC66A2RUB6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC66A2RUB6 AC073869.1-201ENST00000415574 2762 ntBASIC16.71■□□□□ 0.26
CCDC66A2RUB6 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 RN7SL589P-201ENST00000481268 310 ntBASIC16.7■□□□□ 0.26
CCDC66A2RUB6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 AC027601.4-201ENST00000611259 610 ntBASIC16.7■□□□□ 0.26
CCDC66A2RUB6 AC091812.2-201ENST00000619081 385 ntBASIC16.7■□□□□ 0.26
CCDC66A2RUB6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 AC140479.7-201ENST00000636301 2332 ntBASIC16.7■□□□□ 0.26
CCDC66A2RUB6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 HSPA7-201ENST00000445535 1927 ntBASIC16.7■□□□□ 0.26
CCDC66A2RUB6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 CES1P1-201ENST00000421606 1704 ntBASIC16.7■□□□□ 0.26
CCDC66A2RUB6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC66A2RUB6 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 AC127383.1-201ENST00000444697 1800 ntBASIC16.69■□□□□ 0.26
CCDC66A2RUB6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 KRT18P3-201ENST00000451602 1288 ntBASIC16.69■□□□□ 0.26
CCDC66A2RUB6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.69■□□□□ 0.26
CCDC66A2RUB6 FAM197Y3-203ENST00000618346 717 ntBASIC16.69■□□□□ 0.26
CCDC66A2RUB6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 AL136982.4-201ENST00000437689 1740 ntBASIC16.69■□□□□ 0.26
CCDC66A2RUB6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC66A2RUB6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms