Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GPR53P-205ENST00000457298 1084 ntBASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PHKG1P2-201ENST00000457537 863 ntBASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 WASH4P-201ENST00000564273 1246 ntBASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RRP7BP-205ENST00000566851 833 ntBASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CLK3P2-201ENST00000427566 1453 ntBASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC023024.2-201ENST00000623561 1993 ntBASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SBF1P1-201ENST00000444527 5631 ntBASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RARRES2P5-201ENST00000564013 466 ntBASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL359881.2-201ENST00000602973 570 ntBASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 Z97205.2-201ENST00000564697 1639 ntBASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms