Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 AC011270.2-201ENST00000624293 2550 ntBASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 RPL13P2-201ENST00000440687 659 ntBASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
TRGV1A0A0A0MS02 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 TNRC18P2-201ENST00000417666 2714 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AL121723.1-201ENST00000445194 1519 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms