Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 AC104457.1-201ENST00000401024 814 ntBASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 KLF2P4-201ENST00000451959 1225 ntBASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 AC036164.1-201ENST00000570544 333 ntBASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 CU634019.7-201ENST00000624153 1185 ntBASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 FP236241.2-201ENST00000624906 1185 ntBASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 PCDHA3-202ENST00000532566 4594 ntBASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 AGAP7P-201ENST00000582299 2062 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 AGAP14-201ENST00000624701 2060 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 DBET-201ENST00000630918 3363 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 AC099336.1-201ENST00000417053 1171 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 MIR5189-201ENST00000577370 114 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 MIR6869-201ENST00000619434 62 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 KRT8P22-201ENST00000562317 1415 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 MST1L-201ENST00000442552 2185 ntBASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHB1Q9Y5F3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms