Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 REXO1L6P-201ENST00000603433 1515 ntBASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 MST1L-201ENST00000442552 2185 ntBASIC18.57■□□□□ 0.56
HMG20BQ9P0W2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 REXO1L5P-201ENST00000622260 2098 ntBASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 MROH4P-201ENST00000431302 1578 ntBASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 GHSR-202ENST00000427970 912 ntBASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMG20BQ9P0W2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 AC103702.1-201ENST00000548801 2630 ntBASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 AL157414.3-201ENST00000624276 1954 ntBASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 LRRC59-203ENST00000576448 1531 ntBASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 AL359258.3-201ENST00000622910 2331 ntBASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 AL596257.1-201ENST00000641463 2694 ntBASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.55■□□□□ 0.56
HMG20BQ9P0W2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms