Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 RPL7P3-201ENST00000441388 714 ntBASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 AC007551.1-201ENST00000457394 519 ntBASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ATP6V0A4Q9HBG4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 AL158070.2-201ENST00000623713 1621 ntBASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 AC112693.3-201ENST00000624819 1983 ntBASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 C18orf15-201ENST00000623680 2534 ntBASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0A4Q9HBG4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 KLF2P2-201ENST00000416807 1039 ntBASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AC099336.1-201ENST00000417053 1171 ntBASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 CSF2RBP1-201ENST00000447905 391 ntBASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AC114812.1-204ENST00000449669 728 ntBASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AC106760.1-201ENST00000508690 800 ntBASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AL583810.1-201ENST00000553344 1045 ntBASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 PRSS30P-206ENST00000641773 873 ntBASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.01■□□□□ 0.31
ATP6V0A4Q9HBG4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A4Q9HBG4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A4Q9HBG4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A4Q9HBG4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ATP6V0A4Q9HBG4 KRT8P35-201ENST00000483942 1338 ntBASIC17■□□□□ 0.31
ATP6V0A4Q9HBG4 ZBTB45P1-201ENST00000452761 1456 ntBASIC17■□□□□ 0.31
ATP6V0A4Q9HBG4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17■□□□□ 0.31
ATP6V0A4Q9HBG4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms