Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 AC092127.1-201ENST00000567093 3455 ntBASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 KRT43P-201ENST00000434019 910 ntBASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 AP001582.1-201ENST00000525856 295 ntBASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 AP001063.1-201ENST00000568332 529 ntBASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 AC009486.1-201ENST00000569860 813 ntBASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 AC127383.1-201ENST00000444697 1800 ntBASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.34□□□□□ -0.11
CDCP1Q9H5V8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDCP1Q9H5V8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDCP1Q9H5V8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDCP1Q9H5V8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDCP1Q9H5V8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDCP1Q9H5V8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CDCP1Q9H5V8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDCP1Q9H5V8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CDCP1Q9H5V8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 MIR658-201ENST00000385210 100 ntBASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 BCRP2-202ENST00000447763 634 ntBASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 AC093433.1-201ENST00000458048 571 ntBASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 BCRP6-201ENST00000510112 632 ntBASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 BCRP7-201ENST00000511549 544 ntBASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 AC068587.3-201ENST00000526613 355 ntBASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.33□□□□□ -0.12
CDCP1Q9H5V8 AL022328.1-201ENST00000610050 478 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms