Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AC103988.2-201ENST00000561804 725 ntBASIC16.6■□□□□ 0.25
HIPK3Q9H422 DUX4L47-201ENST00000566374 394 ntBASIC16.6■□□□□ 0.25
HIPK3Q9H422 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AC008741.2-201ENST00000612792 3115 ntBASIC16.6■□□□□ 0.25
HIPK3Q9H422 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 HLA-K-203ENST00000430151 1046 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 CEP164P1-201ENST00000455142 418 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 AC116345.2-201ENST00000512837 523 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 IGLV3-15-201ENST00000518356 244 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 AC090857.1-201ENST00000527400 390 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 RTN3P1-201ENST00000536295 711 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 MIR4783-201ENST00000580343 82 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 AC009955.4-201ENST00000597192 544 ntBASIC16.59■□□□□ 0.25
HIPK3Q9H422 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK3Q9H422 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HIPK3Q9H422 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK3Q9H422 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK3Q9H422 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
HIPK3Q9H422 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK3Q9H422 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.25
HIPK3Q9H422 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HIPK3Q9H422 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
HIPK3Q9H422 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK3Q9H422 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.58■□□□□ 0.25
HIPK3Q9H422 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK3Q9H422 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms