Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 AL162727.3-201ENST00000635661 2787 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.17■□□□□ 0.18
RAD9AQ99638 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAD9AQ99638 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.17■□□□□ 0.18
RAD9AQ99638 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 AL627231.1-201ENST00000394467 1125 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 LINC02447-202ENST00000501888 2146 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.17■□□□□ 0.18
RAD9AQ99638 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.17■□□□□ 0.18
RAD9AQ99638 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.17■□□□□ 0.18
RAD9AQ99638 AC135983.4-201ENST00000564116 1262 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.17■□□□□ 0.18
RAD9AQ99638 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 AC008805.1-201ENST00000590892 364 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.17■□□□□ 0.18
RAD9AQ99638 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
RAD9AQ99638 AC103810.10-201ENST00000606504 343 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 AC092171.5-201ENST00000608012 942 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 AC051619.9-201ENST00000623237 597 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
RAD9AQ99638 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 PCDHA14-201ENST00000506751 2298 ntBASIC16.17■□□□□ 0.18
RAD9AQ99638 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.17■□□□□ 0.18
RAD9AQ99638 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.17■□□□□ 0.18
RAD9AQ99638 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAD9AQ99638 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.17■□□□□ 0.18
RAD9AQ99638 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAD9AQ99638 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
RAD9AQ99638 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RAD9AQ99638 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RAD9AQ99638 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAD9AQ99638 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.16■□□□□ 0.18
RAD9AQ99638 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.16■□□□□ 0.18
RAD9AQ99638 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.16■□□□□ 0.18
RAD9AQ99638 AC078991.1-201ENST00000437297 610 ntBASIC16.16■□□□□ 0.18
RAD9AQ99638 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.16■□□□□ 0.18
RAD9AQ99638 VDAC1P1-201ENST00000439229 848 ntBASIC16.16■□□□□ 0.18
RAD9AQ99638 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.16■□□□□ 0.18
RAD9AQ99638 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.16■□□□□ 0.18
RAD9AQ99638 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.16■□□□□ 0.18
RAD9AQ99638 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 AC138696.2-201ENST00000607376 223 ntBASIC16.16■□□□□ 0.18
RAD9AQ99638 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.16■□□□□ 0.18
RAD9AQ99638 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAD9AQ99638 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAD9AQ99638 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 AL360270.3-201ENST00000609118 1348 ntBASIC16.16■□□□□ 0.18
RAD9AQ99638 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAD9AQ99638 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.16■□□□□ 0.18
RAD9AQ99638 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms