Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC023157.3-201ENST00000619086 2088 ntBASIC12.84□□□□□ -0.35
CCL13Q99616 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL13Q99616 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCL13Q99616 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCL13Q99616 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCL13Q99616 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 GHSR-202ENST00000427970 912 ntBASIC12.84□□□□□ -0.35
CCL13Q99616 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.84□□□□□ -0.35
CCL13Q99616 AL162726.2-201ENST00000438986 1017 ntBASIC12.84□□□□□ -0.35
CCL13Q99616 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.84□□□□□ -0.35
CCL13Q99616 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL13Q99616 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CCL13Q99616 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.84□□□□□ -0.35
CCL13Q99616 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL13Q99616 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 AC007787.1-201ENST00000588095 1583 ntBASIC12.84□□□□□ -0.35
CCL13Q99616 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL13Q99616 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL13Q99616 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CCL13Q99616 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CCL13Q99616 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CCL13Q99616 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CCL13Q99616 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CCL13Q99616 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CCL13Q99616 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CCL13Q99616 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 AC011495.1-201ENST00000498085 584 ntBASIC12.83□□□□□ -0.36
CCL13Q99616 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.83□□□□□ -0.36
CCL13Q99616 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 ENPP7P5-201ENST00000541031 1031 ntBASIC12.83□□□□□ -0.36
CCL13Q99616 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CCL13Q99616 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CCL13Q99616 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.83□□□□□ -0.36
CCL13Q99616 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.83□□□□□ -0.36
CCL13Q99616 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 BX539320.1-201ENST00000623759 877 ntBASIC12.83□□□□□ -0.36
CCL13Q99616 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CCL13Q99616 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CCL13Q99616 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.83□□□□□ -0.36
CCL13Q99616 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL13Q99616 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL13Q99616 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms