Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 Z69890.1-201ENST00000382990 339 ntBASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 AL583805.1-201ENST00000391389 531 ntBASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 PHBP15-201ENST00000574228 665 ntBASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 MIR4522-201ENST00000584932 87 ntBASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 AC015909.3-201ENST00000572855 1794 ntBASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 AL137783.1-201ENST00000623494 1896 ntBASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.35■□□□□ 0.21
TRIM43Q96BQ3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 AL627422.1-201ENST00000434104 580 ntBASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 AP000358.1-201ENST00000456260 156 ntBASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 AC079328.2-201ENST00000561241 3354 ntBASIC16.34■□□□□ 0.21
TRIM43Q96BQ3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 LINC02447-202ENST00000501888 2146 ntBASIC16.33■□□□□ 0.21
TRIM43Q96BQ3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 AC080080.1-201ENST00000625121 2420 ntBASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 SIGLEC18P-201ENST00000602271 909 ntBASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 AC025262.2-201ENST00000623975 1056 ntBASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 AC006449.5-201ENST00000610658 2098 ntBASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM43Q96BQ3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms