Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 AC243562.1-201ENST00000560672 389 ntBASIC13.65□□□□□ -0.22
RFT1Q96AA3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.65□□□□□ -0.22
RFT1Q96AA3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RFT1Q96AA3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 UXT-AS1-201ENST00000590504 1525 ntBASIC13.64□□□□□ -0.23
RFT1Q96AA3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AL359881.3-201ENST00000602640 1721 ntBASIC13.64□□□□□ -0.23
RFT1Q96AA3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 SPCS2P4-201ENST00000436160 681 ntBASIC13.64□□□□□ -0.23
RFT1Q96AA3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 RN7SL589P-201ENST00000481268 310 ntBASIC13.64□□□□□ -0.23
RFT1Q96AA3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 IGHV3-62-201ENST00000520057 340 ntBASIC13.64□□□□□ -0.23
RFT1Q96AA3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 FAM86C2P-203ENST00000528684 1004 ntBASIC13.64□□□□□ -0.23
RFT1Q96AA3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms