Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 GIMAP3P-201ENST00000495150 836 ntBASIC16.31■□□□□ 0.2
LMO3Q8TAP4 AC022616.1-201ENST00000518688 554 ntBASIC16.31■□□□□ 0.2
LMO3Q8TAP4 AL033527.5-201ENST00000641382 801 ntBASIC16.31■□□□□ 0.2
LMO3Q8TAP4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LMO3Q8TAP4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 AC018665.1-201ENST00000622927 1362 ntBASIC16.3■□□□□ 0.2
LMO3Q8TAP4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.3■□□□□ 0.2
LMO3Q8TAP4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 AL162726.2-201ENST00000438986 1017 ntBASIC16.3■□□□□ 0.2
LMO3Q8TAP4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 AC138761.1-201ENST00000584393 385 ntBASIC16.3■□□□□ 0.2
LMO3Q8TAP4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LMO3Q8TAP4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 AC113367.3-201ENST00000508316 1912 ntBASIC16.29■□□□□ 0.2
LMO3Q8TAP4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 AC055811.4-201ENST00000624039 1754 ntBASIC16.29■□□□□ 0.2
LMO3Q8TAP4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 AC004466.1-201ENST00000599515 1080 ntBASIC16.29■□□□□ 0.2
LMO3Q8TAP4 AL603764.1-201ENST00000636452 321 ntBASIC16.29■□□□□ 0.2
LMO3Q8TAP4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms