Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NUP43Q8NFH3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC106881.1-201ENST00000605849 3329 ntBASIC14.35□□□□□ -0.11
NUP43Q8NFH3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 DRD5P1-201ENST00000456605 1438 ntBASIC14.35□□□□□ -0.11
NUP43Q8NFH3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.35□□□□□ -0.11
NUP43Q8NFH3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AL049840.4-201ENST00000602422 811 ntBASIC14.35□□□□□ -0.11
NUP43Q8NFH3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP43Q8NFH3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.34□□□□□ -0.11
NUP43Q8NFH3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 MIR770-201ENST00000390219 98 ntBASIC14.34□□□□□ -0.11
NUP43Q8NFH3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 UGT1A2P-201ENST00000454886 866 ntBASIC14.34□□□□□ -0.11
NUP43Q8NFH3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 RRP7BP-205ENST00000566851 833 ntBASIC14.34□□□□□ -0.11
NUP43Q8NFH3 AC027796.2-201ENST00000575326 344 ntBASIC14.34□□□□□ -0.11
NUP43Q8NFH3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP43Q8NFH3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms