Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 ADH5P3-201ENST00000433842 1137 ntBASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 SLC25A39P2-201ENST00000537614 270 ntBASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AL450487.1-201ENST00000426799 995 ntBASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 TARDBPP1-201ENST00000442013 1203 ntBASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AC106730.1-201ENST00000566722 1090 ntBASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NUDCD3Q8IVD9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NUDCD3Q8IVD9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NUDCD3Q8IVD9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms