Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD1LQ86WJ1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.89■□□□□ 0.62
CHD1LQ86WJ1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD1LQ86WJ1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHD1LQ86WJ1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD1LQ86WJ1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHD1LQ86WJ1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 AC068587.6-202ENST00000641839 5619 ntBASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD1LQ86WJ1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 MIR8072-201ENST00000614241 80 ntBASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 AL137783.1-201ENST00000623494 1896 ntBASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD1LQ86WJ1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 AC139749.1-202ENST00000617529 3139 ntBASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD1LQ86WJ1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms