Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 AL590440.2-201ENST00000641973 1595 ntBASIC20.05■□□□□ 0.8
USP31Q70CQ4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 AC006480.2-201ENST00000609770 1337 ntBASIC20.05■□□□□ 0.8
USP31Q70CQ4 AC092978.1-202ENST00000637590 1327 ntBASIC20.05■□□□□ 0.8
USP31Q70CQ4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 AC069218.1-201ENST00000435269 762 ntBASIC20.05■□□□□ 0.8
USP31Q70CQ4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP31Q70CQ4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.05■□□□□ 0.8
USP31Q70CQ4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 AL035414.1-201ENST00000451327 857 ntBASIC20.04■□□□□ 0.8
USP31Q70CQ4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP31Q70CQ4 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.04■□□□□ 0.8
USP31Q70CQ4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP31Q70CQ4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP31Q70CQ4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP31Q70CQ4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
USP31Q70CQ4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP31Q70CQ4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP31Q70CQ4 AC026316.1-201ENST00000398900 414 ntBASIC20.03■□□□□ 0.8
USP31Q70CQ4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP31Q70CQ4 MIR5572-201ENST00000583188 137 ntBASIC20.03■□□□□ 0.8
USP31Q70CQ4 AC133540.1-201ENST00000620845 1019 ntBASIC20.03■□□□□ 0.8
USP31Q70CQ4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP31Q70CQ4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.03■□□□□ 0.8
USP31Q70CQ4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP31Q70CQ4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP31Q70CQ4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms