Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 KRT8P31-201ENST00000504812 1408 ntBASIC12.42□□□□□ -0.42
VPS13CQ709C8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 POU5F1P2-201ENST00000521750 823 ntBASIC12.42□□□□□ -0.42
VPS13CQ709C8 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC136621.1-201ENST00000624017 2304 ntBASIC12.42□□□□□ -0.42
VPS13CQ709C8 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.42□□□□□ -0.42
VPS13CQ709C8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 LINC00528-201ENST00000600723 2160 ntBASIC12.42□□□□□ -0.42
VPS13CQ709C8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC018463.1-201ENST00000456674 917 ntBASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 AP001527.2-201ENST00000614441 631 ntBASIC12.41□□□□□ -0.42
VPS13CQ709C8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 AC012158.2-201ENST00000536546 354 ntBASIC12.41□□□□□ -0.42
VPS13CQ709C8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 MIR6769A-201ENST00000617340 73 ntBASIC12.41□□□□□ -0.42
VPS13CQ709C8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 AL138725.1-201ENST00000407347 1314 ntBASIC12.41□□□□□ -0.42
VPS13CQ709C8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 AC090502.4-201ENST00000551714 1386 ntBASIC12.41□□□□□ -0.42
VPS13CQ709C8 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 CYP4F23P-201ENST00000593402 1579 ntBASIC12.41□□□□□ -0.42
VPS13CQ709C8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 DDX39AP1-201ENST00000445147 1181 ntBASIC12.41□□□□□ -0.42
VPS13CQ709C8 TUBB8P8-201ENST00000458717 1058 ntBASIC12.41□□□□□ -0.42
VPS13CQ709C8 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13CQ709C8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13CQ709C8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13CQ709C8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13CQ709C8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13CQ709C8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
VPS13CQ709C8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13CQ709C8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13CQ709C8 HIST2H2BA-201ENST00000412169 381 ntBASIC12.4□□□□□ -0.42
VPS13CQ709C8 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.4□□□□□ -0.42
VPS13CQ709C8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13CQ709C8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13CQ709C8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.4□□□□□ -0.42
VPS13CQ709C8 AC010234.1-201ENST00000494599 870 ntBASIC12.4□□□□□ -0.42
VPS13CQ709C8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13CQ709C8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13CQ709C8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.4□□□□□ -0.42
VPS13CQ709C8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.4□□□□□ -0.42
VPS13CQ709C8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13CQ709C8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms