Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 GAPDHP40-201ENST00000505218 1006 ntBASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 TDH-203ENST00000531764 1110 ntBASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 ENPP7P5-201ENST00000541031 1031 ntBASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 HILS1-202ENST00000545329 423 ntBASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 MIR5189-201ENST00000577370 114 ntBASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 CLUHP6-201ENST00000580789 941 ntBASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 MSTO2P-201ENST00000314835 1709 ntBASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFWD3Q6PCD5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 ACTG1P3-201ENST00000431775 1114 ntBASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 AP001582.1-201ENST00000525856 295 ntBASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
RFWD3Q6PCD5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 AC020658.6-201ENST00000623564 1870 ntBASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 NORAD-201ENST00000565493 5339 ntBASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 OR8S1-201ENST00000310194 1080 ntBASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 AC079776.1-201ENST00000401540 1152 ntBASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 AC112492.5-201ENST00000421897 457 ntBASIC15.97■□□□□ 0.15
RFWD3Q6PCD5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms