Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 PDIA3P2-201ENST00000428073 158 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 NOC2LP1-201ENST00000450578 752 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 CEP164P1-201ENST00000455142 418 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 AL160314.3-201ENST00000556041 767 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 SNORD3B-2-202ENST00000571722 791 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 MIR4750-201ENST00000584564 56 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 COX6A1P2-201ENST00000620597 330 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 AL360270.3-201ENST00000609118 1348 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 AC010141.1-201ENST00000411585 623 ntBASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 FGFR3P1-201ENST00000449999 601 ntBASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 RN7SL555P-201ENST00000584742 339 ntBASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 AC008805.1-201ENST00000590892 364 ntBASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LYSMD4Q5XG99 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 LTB4R2-202ENST00000528054 3092 ntBASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AC012441.2-201ENST00000444843 739 ntBASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AC104784.1-201ENST00000473096 294 ntBASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AC242376.1-201ENST00000559033 726 ntBASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AC138696.2-201ENST00000607376 223 ntBASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms