Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
DDR1Q08345 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.7■□□□□ 0.58
DDR1Q08345 AL031713.1-201ENST00000564813 661 ntBASIC18.7■□□□□ 0.58
DDR1Q08345 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.7■□□□□ 0.58
DDR1Q08345 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.7■□□□□ 0.58
DDR1Q08345 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.7■□□□□ 0.58
DDR1Q08345 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 REXO1L4P-201ENST00000605109 1937 ntBASIC18.7■□□□□ 0.58
DDR1Q08345 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DDR1Q08345 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DDR1Q08345 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
DDR1Q08345 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.69■□□□□ 0.58
DDR1Q08345 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DDR1Q08345 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DDR1Q08345 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 PCDHA14-201ENST00000506751 2298 ntBASIC18.69■□□□□ 0.58
DDR1Q08345 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
DDR1Q08345 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.69■□□□□ 0.58
DDR1Q08345 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.69■□□□□ 0.58
DDR1Q08345 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DDR1Q08345 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.69■□□□□ 0.58
DDR1Q08345 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.69■□□□□ 0.58
DDR1Q08345 RBM8B-201ENST00000555532 525 ntBASIC18.69■□□□□ 0.58
DDR1Q08345 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.69■□□□□ 0.58
DDR1Q08345 AL603832.2-201ENST00000566195 2125 ntBASIC18.69■□□□□ 0.58
DDR1Q08345 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.69■□□□□ 0.58
DDR1Q08345 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.69■□□□□ 0.58
DDR1Q08345 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.69■□□□□ 0.58
DDR1Q08345 AC005632.3-201ENST00000605544 308 ntBASIC18.69■□□□□ 0.58
DDR1Q08345 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.69■□□□□ 0.58
DDR1Q08345 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.69■□□□□ 0.58
DDR1Q08345 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DDR1Q08345 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
DDR1Q08345 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.69■□□□□ 0.58
DDR1Q08345 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DDR1Q08345 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
DDR1Q08345 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DDR1Q08345 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.68■□□□□ 0.58
DDR1Q08345 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
DDR1Q08345 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DDR1Q08345 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DDR1Q08345 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.68■□□□□ 0.58
DDR1Q08345 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.68■□□□□ 0.58
DDR1Q08345 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
DDR1Q08345 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.68■□□□□ 0.58
DDR1Q08345 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.68■□□□□ 0.58
DDR1Q08345 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 PIN4P1-201ENST00000451079 396 ntBASIC18.68■□□□□ 0.58
DDR1Q08345 AC079112.1-201ENST00000454972 939 ntBASIC18.68■□□□□ 0.58
DDR1Q08345 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.68■□□□□ 0.58
DDR1Q08345 AC141586.1-203ENST00000567242 366 ntBASIC18.68■□□□□ 0.58
DDR1Q08345 PHBP15-201ENST00000574228 665 ntBASIC18.68■□□□□ 0.58
DDR1Q08345 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.68■□□□□ 0.58
DDR1Q08345 AC009884.2-201ENST00000603110 324 ntBASIC18.68■□□□□ 0.58
DDR1Q08345 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.68■□□□□ 0.58
DDR1Q08345 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.68■□□□□ 0.58
DDR1Q08345 NKILA-202ENST00000614771 2598 ntBASIC18.68■□□□□ 0.58
DDR1Q08345 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.68■□□□□ 0.58
DDR1Q08345 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDR1Q08345 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.68■□□□□ 0.58
DDR1Q08345 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 AC024909.3-201ENST00000611513 2257 ntBASIC18.67■□□□□ 0.58
DDR1Q08345 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
DDR1Q08345 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDR1Q08345 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms