Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.92□□□□□ -0.02
YBX1P67809 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
YBX1P67809 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.92□□□□□ -0.02
YBX1P67809 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.92□□□□□ -0.02
YBX1P67809 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.92□□□□□ -0.02
YBX1P67809 GAPDHP40-201ENST00000505218 1006 ntBASIC14.92□□□□□ -0.02
YBX1P67809 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.92□□□□□ -0.02
YBX1P67809 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
YBX1P67809 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
YBX1P67809 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.92□□□□□ -0.02
YBX1P67809 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 TMEM261P1-201ENST00000604899 340 ntBASIC14.92□□□□□ -0.02
YBX1P67809 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.92□□□□□ -0.02
YBX1P67809 AC105233.6-201ENST00000642093 218 ntBASIC14.92□□□□□ -0.02
YBX1P67809 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
YBX1P67809 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
YBX1P67809 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
YBX1P67809 LINC01230-201ENST00000625222 3017 ntBASIC14.92□□□□□ -0.02
YBX1P67809 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.92□□□□□ -0.02
YBX1P67809 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.91□□□□□ -0.02
YBX1P67809 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
YBX1P67809 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
YBX1P67809 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.91□□□□□ -0.02
YBX1P67809 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.91□□□□□ -0.02
YBX1P67809 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.91□□□□□ -0.02
YBX1P67809 AC104596.2-201ENST00000512793 793 ntBASIC14.91□□□□□ -0.02
YBX1P67809 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 AC107373.2-201ENST00000607735 490 ntBASIC14.91□□□□□ -0.02
YBX1P67809 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
YBX1P67809 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.91□□□□□ -0.02
YBX1P67809 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
YBX1P67809 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.91□□□□□ -0.02
YBX1P67809 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
YBX1P67809 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms