Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.73□□□□□ -0.21
CLRN1P58418 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.73□□□□□ -0.21
CLRN1P58418 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
CLRN1P58418 AL645728.2-202ENST00000641679 227 ntBASIC13.73□□□□□ -0.21
CLRN1P58418 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLRN1P58418 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.73□□□□□ -0.21
CLRN1P58418 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.73□□□□□ -0.21
CLRN1P58418 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CLRN1P58418 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.73□□□□□ -0.21
CLRN1P58418 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.73□□□□□ -0.21
CLRN1P58418 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.73□□□□□ -0.21
CLRN1P58418 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLRN1P58418 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.73□□□□□ -0.21
CLRN1P58418 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 ZBED1P1-201ENST00000502364 1930 ntBASIC13.72□□□□□ -0.21
CLRN1P58418 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.72□□□□□ -0.21
CLRN1P58418 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLRN1P58418 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CLRN1P58418 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 SPDYE19P-201ENST00000338590 713 ntBASIC13.72□□□□□ -0.21
CLRN1P58418 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.72□□□□□ -0.21
CLRN1P58418 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.72□□□□□ -0.21
CLRN1P58418 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.72□□□□□ -0.21
CLRN1P58418 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.72□□□□□ -0.21
CLRN1P58418 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLRN1P58418 AC012508.2-201ENST00000567613 1472 ntBASIC13.72□□□□□ -0.21
CLRN1P58418 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.72□□□□□ -0.21
CLRN1P58418 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.72□□□□□ -0.21
CLRN1P58418 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
CLRN1P58418 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLRN1P58418 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.72□□□□□ -0.21
CLRN1P58418 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 AC023824.1-201ENST00000562945 2975 ntBASIC13.71□□□□□ -0.21
CLRN1P58418 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.71□□□□□ -0.21
CLRN1P58418 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLRN1P58418 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.71□□□□□ -0.21
CLRN1P58418 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.71□□□□□ -0.21
CLRN1P58418 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLRN1P58418 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.71□□□□□ -0.21
CLRN1P58418 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.71□□□□□ -0.21
CLRN1P58418 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.71□□□□□ -0.21
CLRN1P58418 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
CLRN1P58418 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLRN1P58418 MRPS18AP1-201ENST00000414458 589 ntBASIC13.71□□□□□ -0.21
CLRN1P58418 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CLRN1P58418 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms