Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.87□□□□□ -0.03
PDX1P52945 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
PDX1P52945 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 AL590640.2-201ENST00000457038 527 ntBASIC14.87□□□□□ -0.03
PDX1P52945 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.87□□□□□ -0.03
PDX1P52945 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.87□□□□□ -0.03
PDX1P52945 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.87□□□□□ -0.03
PDX1P52945 AL118558.3-201ENST00000607414 1079 ntBASIC14.87□□□□□ -0.03
PDX1P52945 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.87□□□□□ -0.03
PDX1P52945 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PDX1P52945 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PDX1P52945 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
PDX1P52945 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.87□□□□□ -0.03
PDX1P52945 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDX1P52945 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PDX1P52945 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.86□□□□□ -0.03
PDX1P52945 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 AC073347.1-201ENST00000421633 2643 ntBASIC14.86□□□□□ -0.03
PDX1P52945 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.86□□□□□ -0.03
PDX1P52945 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.86□□□□□ -0.03
PDX1P52945 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PDX1P52945 AC007969.1-201ENST00000433675 447 ntBASIC14.86□□□□□ -0.03
PDX1P52945 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 Z93015.1-201ENST00000451718 390 ntBASIC14.86□□□□□ -0.03
PDX1P52945 KRT8P13-201ENST00000463294 1010 ntBASIC14.86□□□□□ -0.03
PDX1P52945 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.86□□□□□ -0.03
PDX1P52945 MIR4313-201ENST00000580760 101 ntBASIC14.86□□□□□ -0.03
PDX1P52945 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.86□□□□□ -0.03
PDX1P52945 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.86□□□□□ -0.03
PDX1P52945 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.86□□□□□ -0.03
PDX1P52945 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 AL138799.1-201ENST00000448213 1675 ntBASIC14.86□□□□□ -0.03
PDX1P52945 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 KRT8P35-201ENST00000483942 1338 ntBASIC14.86□□□□□ -0.03
PDX1P52945 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
PDX1P52945 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDX1P52945 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDX1P52945 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.85□□□□□ -0.03
PDX1P52945 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms