Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERFP50548 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERFP50548 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERFP50548 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ERFP50548 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ERFP50548 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERFP50548 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERFP50548 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
ERFP50548 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERFP50548 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ERFP50548 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
ERFP50548 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
ERFP50548 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
ERFP50548 AC011474.4-201ENST00000623523 2076 ntBASIC14.88□□□□□ -0.03
ERFP50548 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 PPT1-213ENST00000641319 2388 ntBASIC14.88□□□□□ -0.03
ERFP50548 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.88□□□□□ -0.03
ERFP50548 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.88□□□□□ -0.03
ERFP50548 AL513480.1-201ENST00000451731 511 ntBASIC14.88□□□□□ -0.03
ERFP50548 AC136632.2-201ENST00000512891 861 ntBASIC14.88□□□□□ -0.03
ERFP50548 IGHV3-65-201ENST00000523210 341 ntBASIC14.88□□□□□ -0.03
ERFP50548 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.88□□□□□ -0.03
ERFP50548 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 AP000845.1-201ENST00000581677 2131 ntBASIC14.88□□□□□ -0.03
ERFP50548 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.88□□□□□ -0.03
ERFP50548 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ERFP50548 AC107918.4-202ENST00000641623 219 ntBASIC14.88□□□□□ -0.03
ERFP50548 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
ERFP50548 AL691432.1-201ENST00000596308 1422 ntBASIC14.88□□□□□ -0.03
ERFP50548 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.88□□□□□ -0.03
ERFP50548 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
ERFP50548 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.88□□□□□ -0.03
ERFP50548 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERFP50548 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
ERFP50548 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.87□□□□□ -0.03
ERFP50548 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
ERFP50548 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 KRT18P27-201ENST00000427733 1299 ntBASIC14.87□□□□□ -0.03
ERFP50548 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.87□□□□□ -0.03
ERFP50548 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.87□□□□□ -0.03
ERFP50548 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.87□□□□□ -0.03
ERFP50548 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.87□□□□□ -0.03
ERFP50548 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.87□□□□□ -0.03
ERFP50548 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.87□□□□□ -0.03
ERFP50548 AL078644.1-201ENST00000609881 752 ntBASIC14.87□□□□□ -0.03
ERFP50548 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.87□□□□□ -0.03
ERFP50548 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ERFP50548 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERFP50548 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms