Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 AP001059.3-201ENST00000619053 235 ntBASIC14.14□□□□□ -0.15
SLC9A3P48764 MIR6069-201ENST00000620069 79 ntBASIC14.14□□□□□ -0.15
SLC9A3P48764 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 ST20-AS1-201ENST00000560255 4223 ntBASIC14.14□□□□□ -0.15
SLC9A3P48764 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 ZBED1P1-201ENST00000502364 1930 ntBASIC14.13□□□□□ -0.15
SLC9A3P48764 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SLC9A3P48764 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SLC9A3P48764 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC9A3P48764 AP000347.1-202ENST00000435868 847 ntBASIC14.13□□□□□ -0.15
SLC9A3P48764 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 SERBP1P3-201ENST00000459980 809 ntBASIC14.13□□□□□ -0.15
SLC9A3P48764 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC9A3P48764 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC9A3P48764 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC9A3P48764 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC9A3P48764 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.13□□□□□ -0.15
SLC9A3P48764 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 AL079307.3-201ENST00000556114 283 ntBASIC14.13□□□□□ -0.15
SLC9A3P48764 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.13□□□□□ -0.15
SLC9A3P48764 MIR6080-201ENST00000617359 66 ntBASIC14.13□□□□□ -0.15
SLC9A3P48764 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 AC041040.2-201ENST00000622926 2899 ntBASIC14.13□□□□□ -0.15
SLC9A3P48764 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 CICP11-201ENST00000434745 2827 ntBASIC14.13□□□□□ -0.15
SLC9A3P48764 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.13□□□□□ -0.15
SLC9A3P48764 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.13□□□□□ -0.15
SLC9A3P48764 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLC9A3P48764 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SLC9A3P48764 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC9A3P48764 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms