Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.57□□□□□ -0.08
RORAP35398 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RORAP35398 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
RORAP35398 AL138709.1-201ENST00000614840 1693 ntBASIC14.57□□□□□ -0.08
RORAP35398 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.57□□□□□ -0.08
RORAP35398 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 KRT8P35-201ENST00000483942 1338 ntBASIC14.57□□□□□ -0.08
RORAP35398 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 AC105917.1-201ENST00000506637 2539 ntBASIC14.57□□□□□ -0.08
RORAP35398 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.57□□□□□ -0.08
RORAP35398 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.57□□□□□ -0.08
RORAP35398 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RORAP35398 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
RORAP35398 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.56□□□□□ -0.08
RORAP35398 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 AC105250.1-201ENST00000509378 2057 ntBASIC14.56□□□□□ -0.08
RORAP35398 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RORAP35398 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.56□□□□□ -0.08
RORAP35398 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 FAM86MP-201ENST00000340703 885 ntBASIC14.56□□□□□ -0.08
RORAP35398 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.56□□□□□ -0.08
RORAP35398 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 RPL5P21-201ENST00000404620 815 ntBASIC14.56□□□□□ -0.08
RORAP35398 FAM21FP-201ENST00000426241 1131 ntBASIC14.56□□□□□ -0.08
RORAP35398 AC026954.1-201ENST00000429771 1293 ntBASIC14.56□□□□□ -0.08
RORAP35398 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.56□□□□□ -0.08
RORAP35398 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 AC145423.3-201ENST00000615987 467 ntBASIC14.56□□□□□ -0.08
RORAP35398 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.56□□□□□ -0.08
RORAP35398 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RORAP35398 LINC02228-204ENST00000642115 2962 ntBASIC14.56□□□□□ -0.08
RORAP35398 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RORAP35398 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 AC020658.6-201ENST00000623564 1870 ntBASIC14.55□□□□□ -0.08
RORAP35398 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RORAP35398 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RORAP35398 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 RNU1-114P-201ENST00000365297 166 ntBASIC14.55□□□□□ -0.08
RORAP35398 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 ACTBP8-201ENST00000403258 1108 ntBASIC14.55□□□□□ -0.08
RORAP35398 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 MIR1908-201ENST00000410394 80 ntBASIC14.55□□□□□ -0.08
RORAP35398 KLF2P2-201ENST00000416807 1039 ntBASIC14.55□□□□□ -0.08
RORAP35398 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.55□□□□□ -0.08
RORAP35398 ACTBP11-201ENST00000436287 1126 ntBASIC14.55□□□□□ -0.08
RORAP35398 AL355994.2-201ENST00000447882 704 ntBASIC14.55□□□□□ -0.08
RORAP35398 AC114812.1-204ENST00000449669 728 ntBASIC14.55□□□□□ -0.08
RORAP35398 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.55□□□□□ -0.08
RORAP35398 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms