Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AP000347.1-202ENST00000435868 847 ntBASIC14.28□□□□□ -0.12
TNFRSF1BP20333 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AC004835.2-201ENST00000603762 682 ntBASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AC041040.2-201ENST00000622926 2899 ntBASIC14.28□□□□□ -0.12
TNFRSF1BP20333 AC027601.5-201ENST00000624065 2482 ntBASIC14.28□□□□□ -0.12
TNFRSF1BP20333 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TNFRSF1BP20333 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 Z97205.2-201ENST00000564697 1639 ntBASIC14.27□□□□□ -0.12
TNFRSF1BP20333 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.27□□□□□ -0.12
TNFRSF1BP20333 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 RPL37AP1-201ENST00000412502 279 ntBASIC14.27□□□□□ -0.13
TNFRSF1BP20333 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 DNAJB3-201ENST00000446806 729 ntBASIC14.27□□□□□ -0.13
TNFRSF1BP20333 AC023141.5-201ENST00000458585 616 ntBASIC14.27□□□□□ -0.13
TNFRSF1BP20333 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 AP000344.2-201ENST00000512987 629 ntBASIC14.27□□□□□ -0.13
TNFRSF1BP20333 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 MIR6069-201ENST00000620069 79 ntBASIC14.27□□□□□ -0.13
TNFRSF1BP20333 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.27□□□□□ -0.13
TNFRSF1BP20333 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms