Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL3L1P16619 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.65□□□□□ -0.38
CCL3L1P16619 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CCL3L1P16619 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CCL3L1P16619 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL3L1P16619 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL3L1P16619 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL3L1P16619 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 MROH4P-201ENST00000431302 1578 ntBASIC12.64□□□□□ -0.39
CCL3L1P16619 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL3L1P16619 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCL3L1P16619 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCL3L1P16619 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.64□□□□□ -0.39
CCL3L1P16619 AL162726.2-201ENST00000438986 1017 ntBASIC12.64□□□□□ -0.39
CCL3L1P16619 RN7SL752P-201ENST00000463779 287 ntBASIC12.64□□□□□ -0.39
CCL3L1P16619 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL3L1P16619 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.64□□□□□ -0.39
CCL3L1P16619 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL3L1P16619 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL3L1P16619 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 BX539320.1-201ENST00000623759 877 ntBASIC12.64□□□□□ -0.39
CCL3L1P16619 AC005252.2-201ENST00000624630 1141 ntBASIC12.64□□□□□ -0.39
CCL3L1P16619 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 AGAP7P-201ENST00000582299 2062 ntBASIC12.64□□□□□ -0.39
CCL3L1P16619 AGAP14-201ENST00000624701 2060 ntBASIC12.64□□□□□ -0.39
CCL3L1P16619 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CCL3L1P16619 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL3L1P16619 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL3L1P16619 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL3L1P16619 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 AC093525.8-201ENST00000624099 1342 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 AL157414.3-201ENST00000624276 1954 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 AL158070.2-201ENST00000623713 1621 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms