Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DOAP06340 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DOAP06340 AC020658.6-201ENST00000623564 1870 ntBASIC17.95■□□□□ 0.46
HLA-DOAP06340 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DOAP06340 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 MST1L-201ENST00000442552 2185 ntBASIC17.94■□□□□ 0.46
HLA-DOAP06340 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 MIR663B-201ENST00000408361 115 ntBASIC17.94■□□□□ 0.46
HLA-DOAP06340 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 HSPB1P2-201ENST00000448722 546 ntBASIC17.94■□□□□ 0.46
HLA-DOAP06340 MESTP3-201ENST00000503460 968 ntBASIC17.94■□□□□ 0.46
HLA-DOAP06340 AC026434.2-201ENST00000506094 1078 ntBASIC17.94■□□□□ 0.46
HLA-DOAP06340 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 KRT8P4-201ENST00000509735 1454 ntBASIC17.94■□□□□ 0.46
HLA-DOAP06340 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DOAP06340 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DOAP06340 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 AC008894.3-201ENST00000624324 3103 ntBASIC17.93■□□□□ 0.46
HLA-DOAP06340 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.93■□□□□ 0.46
HLA-DOAP06340 BCYRN1-201ENST00000418539 200 ntBASIC17.93■□□□□ 0.46
HLA-DOAP06340 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 ZNF767P-206ENST00000513792 565 ntBASIC17.93■□□□□ 0.46
HLA-DOAP06340 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 AP003171.2-201ENST00000528208 925 ntBASIC17.93■□□□□ 0.46
HLA-DOAP06340 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 AC004466.1-201ENST00000599515 1080 ntBASIC17.93■□□□□ 0.46
HLA-DOAP06340 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DOAP06340 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DOAP06340 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOAP06340 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOAP06340 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOAP06340 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DOAP06340 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOAP06340 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DOAP06340 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DOAP06340 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOAP06340 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOAP06340 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DOAP06340 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOAP06340 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DOAP06340 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms