Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFBP01127 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
PDGFBP01127 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFBP01127 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.16■□□□□ 0.02
PDGFBP01127 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PDGFBP01127 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDGFBP01127 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFBP01127 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFBP01127 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PDGFBP01127 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFBP01127 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
PDGFBP01127 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFBP01127 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PDGFBP01127 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 MIR557-201ENST00000385239 98 ntBASIC15.15■□□□□ 0.02
PDGFBP01127 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDGFBP01127 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFBP01127 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 AC084752.1-201ENST00000509766 622 ntBASIC15.15■□□□□ 0.02
PDGFBP01127 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.15■□□□□ 0.02
PDGFBP01127 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
PDGFBP01127 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 AC138696.2-201ENST00000607376 223 ntBASIC15.15■□□□□ 0.02
PDGFBP01127 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PDGFBP01127 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFBP01127 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFBP01127 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFBP01127 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFBP01127 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.14■□□□□ 0.01
PDGFBP01127 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 MST1L-201ENST00000442552 2185 ntBASIC15.14■□□□□ 0.01
PDGFBP01127 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
PDGFBP01127 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 BAK1P1-201ENST00000317045 636 ntBASIC15.14■□□□□ 0.01
PDGFBP01127 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 AL807761.2-201ENST00000422849 729 ntBASIC15.14■□□□□ 0.01
PDGFBP01127 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.14■□□□□ 0.01
PDGFBP01127 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.14■□□□□ 0.01
PDGFBP01127 MRPL22P1-201ENST00000505398 616 ntBASIC15.14■□□□□ 0.01
PDGFBP01127 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.14■□□□□ 0.01
PDGFBP01127 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.14■□□□□ 0.01
PDGFBP01127 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.14■□□□□ 0.01
PDGFBP01127 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.14■□□□□ 0.01
PDGFBP01127 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDGFBP01127 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PDGFBP01127 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDGFBP01127 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.13■□□□□ 0.01
PDGFBP01127 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDGFBP01127 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms