Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 PEBP1P2-201ENST00000603980 558 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 AL139339.2-201ENST00000608063 657 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF3O95398 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF3O95398 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 FAM90A21P-201ENST00000510875 1396 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 FAM90A15P-201ENST00000514465 1395 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 FAM90A6P-201ENST00000515148 1394 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 FAM90A16P-201ENST00000526662 1395 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 FAM90A9P-201ENST00000527940 1395 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 FAM90A5P-201ENST00000528738 1395 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 FAM90A14P-201ENST00000530386 1395 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 FAM90A13P-201ENST00000534703 1395 ntBASIC22.34■■□□□ 1.17
RAPGEF3O95398 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF3O95398 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAPGEF3O95398 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC22.34■■□□□ 1.17
RAPGEF3O95398 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC22.33■■□□□ 1.17
RAPGEF3O95398 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 AC244197.1-201ENST00000456494 951 ntBASIC22.33■■□□□ 1.17
RAPGEF3O95398 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC22.33■■□□□ 1.17
RAPGEF3O95398 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC22.33■■□□□ 1.17
RAPGEF3O95398 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF3O95398 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAPGEF3O95398 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.33■■□□□ 1.16
RAPGEF3O95398 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RAPGEF3O95398 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
RAPGEF3O95398 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAPGEF3O95398 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 REXO1L2P-201ENST00000425429 2069 ntBASIC22.32■■□□□ 1.16
RAPGEF3O95398 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 BX088702.1-201ENST00000610784 235 ntBASIC22.32■■□□□ 1.16
RAPGEF3O95398 AL627230.2-201ENST00000613254 655 ntBASIC22.32■■□□□ 1.16
RAPGEF3O95398 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 AC080080.1-201ENST00000625121 2420 ntBASIC22.32■■□□□ 1.16
RAPGEF3O95398 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF3O95398 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPGEF3O95398 TMBIM7P-202ENST00000641474 1516 ntBASIC22.31■■□□□ 1.16
RAPGEF3O95398 FAS-202ENST00000352159 1722 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 AL135901.1-201ENST00000451812 333 ntBASIC22.31■■□□□ 1.16
RAPGEF3O95398 DUX4L50-201ENST00000455245 715 ntBASIC22.31■■□□□ 1.16
RAPGEF3O95398 RPS23-204ENST00000507980 836 ntTSL 2 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 HMGB1P24-201ENST00000611897 328 ntBASIC22.31■■□□□ 1.16
RAPGEF3O95398 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF3O95398 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF3O95398 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms