Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RNF40O75150 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF40O75150 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF40O75150 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RNF40O75150 AC098614.1-201ENST00000368528 745 ntBASIC16.65■□□□□ 0.26
RNF40O75150 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF40O75150 ARSEP1-201ENST00000420443 635 ntBASIC16.65■□□□□ 0.26
RNF40O75150 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF40O75150 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF40O75150 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF40O75150 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF40O75150 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 AJ011931.1-201ENST00000618749 2492 ntBASIC16.65■□□□□ 0.26
RNF40O75150 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF40O75150 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RNF40O75150 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 BTBD7P1-201ENST00000447253 1453 ntBASIC16.65■□□□□ 0.26
RNF40O75150 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF40O75150 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 PCDHA3-202ENST00000532566 4594 ntBASIC16.65■□□□□ 0.26
RNF40O75150 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RNF40O75150 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF40O75150 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.64■□□□□ 0.26
RNF40O75150 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
RNF40O75150 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
RNF40O75150 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 DGCR5-201ENST00000399539 862 ntBASIC16.64■□□□□ 0.25
RNF40O75150 DFFBP1-201ENST00000433250 979 ntBASIC16.64■□□□□ 0.25
RNF40O75150 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 ZNF890P-202ENST00000530367 1156 ntBASIC16.64■□□□□ 0.25
RNF40O75150 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RNF40O75150 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.64■□□□□ 0.25
RNF40O75150 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF40O75150 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF40O75150 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF40O75150 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 AC092127.1-201ENST00000567093 3455 ntBASIC16.63■□□□□ 0.25
RNF40O75150 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF40O75150 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RNF40O75150 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
RNF40O75150 GPR53P-205ENST00000457298 1084 ntBASIC16.63■□□□□ 0.25
RNF40O75150 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
RNF40O75150 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 AL512361.1-201ENST00000554200 418 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms